Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00302 | VDBG_08132 | C9S595 | C9STA7 | Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. | 2-nitropropane dioxygenase. | 0.582 |
VDBG_08109 | VDBG_08110 | C9ST84 | C9ST85 | Regulatory protein. | C2H2-type domain-containing protein. | 0.865 |
VDBG_08109 | VDBG_08132 | C9ST84 | C9STA7 | Regulatory protein. | 2-nitropropane dioxygenase. | 0.509 |
VDBG_08110 | VDBG_08109 | C9ST85 | C9ST84 | C2H2-type domain-containing protein. | Regulatory protein. | 0.865 |
VDBG_08110 | VDBG_08132 | C9ST85 | C9STA7 | C2H2-type domain-containing protein. | 2-nitropropane dioxygenase. | 0.508 |
VDBG_08132 | VDBG_00302 | C9STA7 | C9S595 | 2-nitropropane dioxygenase. | Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. | 0.582 |
VDBG_08132 | VDBG_08109 | C9STA7 | C9ST84 | 2-nitropropane dioxygenase. | Regulatory protein. | 0.509 |
VDBG_08132 | VDBG_08110 | C9STA7 | C9ST85 | 2-nitropropane dioxygenase. | C2H2-type domain-containing protein. | 0.508 |