Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00977 | VDBG_02142 | C9S822 | C9S9H0 | GTPase-activating protein ZNF289. | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | 0.634 |
VDBG_00977 | VDBG_04827 | C9S822 | C9SIE5 | GTPase-activating protein ZNF289. | ADP-ribosylation factor. | 0.970 |
VDBG_00977 | VDBG_05513 | C9S822 | C9SL36 | GTPase-activating protein ZNF289. | GTP-binding protein ypt1. | 0.808 |
VDBG_00977 | VDBG_06729 | C9S822 | C9SPA4 | GTPase-activating protein ZNF289. | ADP-ribosylation factor 1. | 0.696 |
VDBG_00977 | VDBG_08230 | C9S822 | C9SUL0 | GTPase-activating protein ZNF289. | ARF guanine-nucleotide exchange factor 2. | 0.914 |
VDBG_00977 | VDBG_08501 | C9S822 | C9SU80 | GTPase-activating protein ZNF289. | Transport protein SEC7. | 0.508 |
VDBG_02142 | VDBG_00977 | C9S9H0 | C9S822 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | GTPase-activating protein ZNF289. | 0.634 |
VDBG_02142 | VDBG_03653 | C9S9H0 | C9SGP9 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | GTP-binding protein ypt3. | 0.649 |
VDBG_02142 | VDBG_04827 | C9S9H0 | C9SIE5 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | ADP-ribosylation factor. | 0.912 |
VDBG_02142 | VDBG_06813 | C9S9H0 | C9SPI8 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | Phosphatidylinositol 4-kinase PIK1; Belongs to the PI3/PI4-kinase family. | 0.514 |
VDBG_02142 | VDBG_08230 | C9S9H0 | C9SUL0 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | ARF guanine-nucleotide exchange factor 2. | 0.731 |
VDBG_02142 | VDBG_08501 | C9S9H0 | C9SU80 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | Transport protein SEC7. | 0.672 |
VDBG_02578 | VDBG_08501 | C9SE60 | C9SU80 | Uncharacterized protein. | Transport protein SEC7. | 0.472 |
VDBG_03653 | VDBG_02142 | C9SGP9 | C9S9H0 | GTP-binding protein ypt3. | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | 0.649 |
VDBG_03653 | VDBG_04827 | C9SGP9 | C9SIE5 | GTP-binding protein ypt3. | ADP-ribosylation factor. | 0.837 |
VDBG_03653 | VDBG_05513 | C9SGP9 | C9SL36 | GTP-binding protein ypt3. | GTP-binding protein ypt1. | 0.891 |
VDBG_03653 | VDBG_06813 | C9SGP9 | C9SPI8 | GTP-binding protein ypt3. | Phosphatidylinositol 4-kinase PIK1; Belongs to the PI3/PI4-kinase family. | 0.995 |
VDBG_03653 | VDBG_08230 | C9SGP9 | C9SUL0 | GTP-binding protein ypt3. | ARF guanine-nucleotide exchange factor 2. | 0.647 |
VDBG_03653 | VDBG_08501 | C9SGP9 | C9SU80 | GTP-binding protein ypt3. | Transport protein SEC7. | 0.501 |
VDBG_04827 | VDBG_00977 | C9SIE5 | C9S822 | ADP-ribosylation factor. | GTPase-activating protein ZNF289. | 0.970 |
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