Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00431 | VDBG_05364 | C9S5Y5 | C9SKN7 | Inositol-3-phosphate synthase. | CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.741 |
VDBG_00431 | VDBG_08502 | C9S5Y5 | C9SU81 | Inositol-3-phosphate synthase. | Inositol oxygenase. | 0.495 |
VDBG_00431 | VDBG_08507 | C9S5Y5 | C9SU86 | Inositol-3-phosphate synthase. | Inositol-1-monophosphatase. | 0.990 |
VDBG_02546 | VDBG_08502 | C9SDL6 | C9SU81 | NADP-dependent alcohol dehydrogenase. | Inositol oxygenase. | 0.800 |
VDBG_02968 | VDBG_08502 | C9SCP4 | C9SU81 | NADP-dependent alcohol dehydrogenase. | Inositol oxygenase. | 0.800 |
VDBG_03370 | VDBG_08502 | C9SE14 | C9SU81 | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | Inositol oxygenase. | 0.508 |
VDBG_05364 | VDBG_00431 | C9SKN7 | C9S5Y5 | CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Inositol-3-phosphate synthase. | 0.741 |
VDBG_05364 | VDBG_08502 | C9SKN7 | C9SU81 | CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Inositol oxygenase. | 0.903 |
VDBG_05364 | VDBG_08507 | C9SKN7 | C9SU86 | CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Inositol-1-monophosphatase. | 0.955 |
VDBG_06243 | VDBG_08502 | C9SMW9 | C9SU81 | NADP-dependent alcohol dehydrogenase. | Inositol oxygenase. | 0.800 |
VDBG_07696 | VDBG_08502 | C9SS21 | C9SU81 | NADP-dependent alcohol dehydrogenase. | Inositol oxygenase. | 0.800 |
VDBG_08153 | VDBG_08502 | C9STC8 | C9SU81 | Cinnamyl alcohol dehydrogenase. | Inositol oxygenase. | 0.800 |
VDBG_08502 | VDBG_00431 | C9SU81 | C9S5Y5 | Inositol oxygenase. | Inositol-3-phosphate synthase. | 0.495 |
VDBG_08502 | VDBG_02546 | C9SU81 | C9SDL6 | Inositol oxygenase. | NADP-dependent alcohol dehydrogenase. | 0.800 |
VDBG_08502 | VDBG_02968 | C9SU81 | C9SCP4 | Inositol oxygenase. | NADP-dependent alcohol dehydrogenase. | 0.800 |
VDBG_08502 | VDBG_03370 | C9SU81 | C9SE14 | Inositol oxygenase. | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 0.508 |
VDBG_08502 | VDBG_05364 | C9SU81 | C9SKN7 | Inositol oxygenase. | CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.903 |
VDBG_08502 | VDBG_06243 | C9SU81 | C9SMW9 | Inositol oxygenase. | NADP-dependent alcohol dehydrogenase. | 0.800 |
VDBG_08502 | VDBG_07696 | C9SU81 | C9SS21 | Inositol oxygenase. | NADP-dependent alcohol dehydrogenase. | 0.800 |
VDBG_08502 | VDBG_08153 | C9SU81 | C9STC8 | Inositol oxygenase. | Cinnamyl alcohol dehydrogenase. | 0.800 |
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