STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_087483-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (447 aa)    
Predicted Functional Partners:
VDBG_00259
Malonyl CoA-acyl carrier protein transacylase.
 
 0.998
VDBG_09823
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.996
VDBG_06297
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.937
VDBG_00575
Versicolorin reductase.
  
 0.930
VDBG_09243
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 0.930
VDBG_01018
Fatty acid synthase subunit beta dehydratase; Belongs to the fungal fatty acid synthetase subunit beta family.
     
 0.916
VDBG_01020
Fatty acid synthase subunit alpha reductase.
     
 0.916
VDBG_04167
Elongation of fatty acids protein.
     
 0.904
VDBG_02312
Octanoyltransferase.
   
 0.827
VDBG_02755
Acetyl-CoA carboxylase.
  
  
 0.704
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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