Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01373 | VDBG_01544 | C9S7P7 | C9SAI7 | GTP-binding protein RHO1. | GTP-binding protein rho4. | 0.413 |
VDBG_01373 | VDBG_02013 | C9S7P7 | C9SC20 | GTP-binding protein RHO1. | Cell division control protein. | 0.565 |
VDBG_01373 | VDBG_04663 | C9S7P7 | C9SHY1 | GTP-binding protein RHO1. | ELMO/CED-12 family protein. | 0.605 |
VDBG_01373 | VDBG_08700 | C9S7P7 | C9SUX5 | GTP-binding protein RHO1. | Cell division control protein. | 0.573 |
VDBG_01373 | VDBG_09081 | C9S7P7 | C9SW06 | GTP-binding protein RHO1. | Uncharacterized protein. | 0.439 |
VDBG_01544 | VDBG_01373 | C9SAI7 | C9S7P7 | GTP-binding protein rho4. | GTP-binding protein RHO1. | 0.413 |
VDBG_01544 | VDBG_02013 | C9SAI7 | C9SC20 | GTP-binding protein rho4. | Cell division control protein. | 0.599 |
VDBG_01544 | VDBG_02308 | C9SAI7 | C9S9Y6 | GTP-binding protein rho4. | GTP-binding protein RHO3. | 0.594 |
VDBG_01544 | VDBG_04663 | C9SAI7 | C9SHY1 | GTP-binding protein rho4. | ELMO/CED-12 family protein. | 0.605 |
VDBG_01544 | VDBG_08700 | C9SAI7 | C9SUX5 | GTP-binding protein rho4. | Cell division control protein. | 0.600 |
VDBG_01544 | VDBG_09081 | C9SAI7 | C9SW06 | GTP-binding protein rho4. | Uncharacterized protein. | 0.439 |
VDBG_02013 | VDBG_01373 | C9SC20 | C9S7P7 | Cell division control protein. | GTP-binding protein RHO1. | 0.565 |
VDBG_02013 | VDBG_01544 | C9SC20 | C9SAI7 | Cell division control protein. | GTP-binding protein rho4. | 0.599 |
VDBG_02013 | VDBG_02308 | C9SC20 | C9S9Y6 | Cell division control protein. | GTP-binding protein RHO3. | 0.571 |
VDBG_02013 | VDBG_04663 | C9SC20 | C9SHY1 | Cell division control protein. | ELMO/CED-12 family protein. | 0.815 |
VDBG_02013 | VDBG_05269 | C9SC20 | C9SKE2 | Cell division control protein. | GTP-binding protein RHO1. | 0.580 |
VDBG_02013 | VDBG_09081 | C9SC20 | C9SW06 | Cell division control protein. | Uncharacterized protein. | 0.439 |
VDBG_02308 | VDBG_01544 | C9S9Y6 | C9SAI7 | GTP-binding protein RHO3. | GTP-binding protein rho4. | 0.594 |
VDBG_02308 | VDBG_02013 | C9S9Y6 | C9SC20 | GTP-binding protein RHO3. | Cell division control protein. | 0.571 |
VDBG_02308 | VDBG_04663 | C9S9Y6 | C9SHY1 | GTP-binding protein RHO3. | ELMO/CED-12 family protein. | 0.605 |
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