STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_09145Sulphydryl oxidase. (407 aa)    
Predicted Functional Partners:
VDBG_02036
Thioredoxin domain-containing protein.
  
 0.933
VDBG_03470
Thioredoxin; Belongs to the thioredoxin family.
  
 0.933
VDBG_03409
2-oxoglutarate dehydrogenase E1.
  
 0.895
VDBG_07909
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.878
VDBG_01915
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.874
VDBG_08079
2-oxoisovalerate dehydrogenase subunit beta.
  
 0.874
VDBG_02112
Phosphopantothenoylcysteine decarboxylase.
    
 0.845
VDBG_00214
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 0.802
VDBG_04820
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.793
VDBG_05083
Dihydrolipoamide succinyltransferase.
  
 0.793
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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