STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_09266Oxidoreductase. (451 aa)    
Predicted Functional Partners:
VDBG_00766
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.665
VDBG_06582
Nitrate reductase.
    
 0.665
VDBG_07661
Predicted protein.
    
 0.665
VDBG_06495
Adrenodoxin.
  
 0.636
VDBG_05583
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.455
VDBG_05216
NADH-ubiquinone oxidoreductase 78 kDa subunit.
  
 
 0.418
VDBG_09885
Pyrazinamidase/nicotinamidase.
    
  0.413
VDBG_00213
Oxidoreductase.
   
 0.407
VDBG_02214
FAD dependent oxidoreductase superfamily.
   
 0.407
VDBG_03157
TRI14.
   
 0.407
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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