Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01097 | VDBG_04023 | C9S985 | C9SFC8 | Bli-3. | Tryptophan synthase. | 0.632 |
VDBG_01097 | VDBG_09592 | C9S985 | C9SWU1 | Bli-3. | S-(Hydroxymethyl)glutathione dehydrogenase. | 0.438 |
VDBG_02963 | VDBG_04023 | C9SCN9 | C9SFC8 | 8-amino-7-oxononanoate synthase. | Tryptophan synthase. | 0.490 |
VDBG_02963 | VDBG_06681 | C9SCN9 | C9SP56 | 8-amino-7-oxononanoate synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.732 |
VDBG_02963 | VDBG_07422 | C9SCN9 | C9SR97 | 8-amino-7-oxononanoate synthase. | Serine palmitoyltransferase. | 0.978 |
VDBG_02963 | VDBG_07633 | C9SCN9 | C9SRV8 | 8-amino-7-oxononanoate synthase. | 8-amino-7-oxononanoate synthase. | 0.909 |
VDBG_02963 | VDBG_09592 | C9SCN9 | C9SWU1 | 8-amino-7-oxononanoate synthase. | S-(Hydroxymethyl)glutathione dehydrogenase. | 0.495 |
VDBG_04023 | VDBG_01097 | C9SFC8 | C9S985 | Tryptophan synthase. | Bli-3. | 0.632 |
VDBG_04023 | VDBG_02963 | C9SFC8 | C9SCN9 | Tryptophan synthase. | 8-amino-7-oxononanoate synthase. | 0.490 |
VDBG_04023 | VDBG_06681 | C9SFC8 | C9SP56 | Tryptophan synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.999 |
VDBG_04023 | VDBG_07422 | C9SFC8 | C9SR97 | Tryptophan synthase. | Serine palmitoyltransferase. | 0.893 |
VDBG_04023 | VDBG_07633 | C9SFC8 | C9SRV8 | Tryptophan synthase. | 8-amino-7-oxononanoate synthase. | 0.490 |
VDBG_04023 | VDBG_07722 | C9SFC8 | C9SS47 | Tryptophan synthase. | Serine palmitoyltransferase. | 0.893 |
VDBG_04023 | VDBG_08681 | C9SFC8 | C9SUV6 | Tryptophan synthase. | 5-aminolevulinate synthase. | 0.490 |
VDBG_04023 | VDBG_09592 | C9SFC8 | C9SWU1 | Tryptophan synthase. | S-(Hydroxymethyl)glutathione dehydrogenase. | 0.470 |
VDBG_06681 | VDBG_02963 | C9SP56 | C9SCN9 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 8-amino-7-oxononanoate synthase. | 0.732 |
VDBG_06681 | VDBG_04023 | C9SP56 | C9SFC8 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Tryptophan synthase. | 0.999 |
VDBG_06681 | VDBG_07422 | C9SP56 | C9SR97 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Serine palmitoyltransferase. | 0.732 |
VDBG_06681 | VDBG_07633 | C9SP56 | C9SRV8 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 8-amino-7-oxononanoate synthase. | 0.732 |
VDBG_06681 | VDBG_07722 | C9SP56 | C9SS47 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Serine palmitoyltransferase. | 0.732 |
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