STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_09592S-(Hydroxymethyl)glutathione dehydrogenase. (227 aa)    
Predicted Functional Partners:
VDBG_06681
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 0.496
VDBG_02963
8-amino-7-oxononanoate synthase.
  
 
 0.495
VDBG_07422
Serine palmitoyltransferase.
  
 
 0.495
VDBG_07633
8-amino-7-oxononanoate synthase.
  
 
 0.495
VDBG_07722
Serine palmitoyltransferase.
  
 
 0.495
VDBG_08681
5-aminolevulinate synthase.
  
 
 0.495
VDBG_04023
Tryptophan synthase.
     
 0.470
VDBG_06750
Xylulose kinase.
  
 
 0.470
VDBG_01097
Bli-3.
  
  
 0.438
VDBG_08406
Mannose-6-phosphate isomerase.
  
  
 0.434
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
Server load: low (24%) [HD]