STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_09765N-acetylmuramic acid 6-phosphate etherase. (418 aa)    
Predicted Functional Partners:
VDBG_08004
N-acetylglucosamine-6-phosphate deacetylase.
    
 0.990
VDBG_01943
Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily.
   
 
 0.951
VDBG_08002
Glucosamine-6-phosphate isomerase.
  
 
 0.645
VDBG_08853
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.645
VDBG_09874
Glucosamine-6-phosphate isomerase.
  
 
 0.645
VDBG_03084
Bifunctional protein GAL10.
   
  
 0.594
VDBG_06034
PGM_PMM_I domain-containing protein.
  
  
 0.551
VDBG_00414
Cytosolic non-specific dipeptidase.
   
  
 0.544
VDBG_04730
Glucosamine-fructose-6-phosphate aminotransferase.
  
  
 0.537
VDBG_00031
Dug3p.
  
  
 0.527
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.