Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00573 | VDBG_05587 | C9S6F3 | C9SLB0 | Uncharacterized protein. | HMA domain-containing protein. | 0.707 |
VDBG_00573 | VDBG_09798 | C9S6F3 | C9SY23 | Uncharacterized protein. | Predicted protein. | 0.436 |
VDBG_00739 | VDBG_08221 | C9S746 | C9STJ6 | Siderophore regulation protein. | Cross-pathway control protein. | 0.563 |
VDBG_00739 | VDBG_09798 | C9S746 | C9SY23 | Siderophore regulation protein. | Predicted protein. | 0.402 |
VDBG_04159 | VDBG_09798 | C9SFV5 | C9SY23 | Histone acetyltransferase type B subunit 2. | Predicted protein. | 0.622 |
VDBG_04717 | VDBG_09798 | C9SI35 | C9SY23 | C2H2 finger domain containing protein FlbC. | Predicted protein. | 0.460 |
VDBG_05587 | VDBG_00573 | C9SLB0 | C9S6F3 | HMA domain-containing protein. | Uncharacterized protein. | 0.707 |
VDBG_05587 | VDBG_09798 | C9SLB0 | C9SY23 | HMA domain-containing protein. | Predicted protein. | 0.428 |
VDBG_08221 | VDBG_00739 | C9STJ6 | C9S746 | Cross-pathway control protein. | Siderophore regulation protein. | 0.563 |
VDBG_08221 | VDBG_09798 | C9STJ6 | C9SY23 | Cross-pathway control protein. | Predicted protein. | 0.438 |
VDBG_09798 | VDBG_00573 | C9SY23 | C9S6F3 | Predicted protein. | Uncharacterized protein. | 0.436 |
VDBG_09798 | VDBG_00739 | C9SY23 | C9S746 | Predicted protein. | Siderophore regulation protein. | 0.402 |
VDBG_09798 | VDBG_04159 | C9SY23 | C9SFV5 | Predicted protein. | Histone acetyltransferase type B subunit 2. | 0.622 |
VDBG_09798 | VDBG_04717 | C9SY23 | C9SI35 | Predicted protein. | C2H2 finger domain containing protein FlbC. | 0.460 |
VDBG_09798 | VDBG_05587 | C9SY23 | C9SLB0 | Predicted protein. | HMA domain-containing protein. | 0.428 |
VDBG_09798 | VDBG_08221 | C9SY23 | C9STJ6 | Predicted protein. | Cross-pathway control protein. | 0.438 |