Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_00158 | VDBG_01189 | C9S8X4 | C9S5L6 | Actin. | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | 0.668 |
VDBG_00158 | VDBG_01497 | C9S8X4 | C9SAB1 | Actin. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.832 |
VDBG_00158 | VDBG_01534 | C9S8X4 | C9SAH7 | Actin. | Serine/threonine-protein phosphatase. | 0.450 |
VDBG_00158 | VDBG_06146 | C9S8X4 | C9SMM2 | Actin. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.833 |
VDBG_00158 | VDBG_08181 | C9S8X4 | C9STF6 | Actin. | Tubulin beta-2 chain. | 0.830 |
VDBG_00158 | VDBG_10147 | C9S8X4 | C9SZ22 | Actin. | Casein kinase I. | 0.437 |
VDBG_00254 | VDBG_01189 | C9S547 | C9S5L6 | Casein kinase I. | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | 0.473 |
VDBG_00254 | VDBG_04312 | C9S547 | C9SGY3 | Casein kinase I. | Pheromone receptor. | 0.904 |
VDBG_00254 | VDBG_08677 | C9S547 | C9SUV2 | Casein kinase I. | Pheromone receptor. | 0.900 |
VDBG_00254 | VDBG_08720 | C9S547 | C9SUZ5 | Casein kinase I. | Protein phosphatase PP2A regulatory subunit A. | 0.438 |
VDBG_00254 | VDBG_10147 | C9S547 | C9SZ22 | Casein kinase I. | Casein kinase I. | 0.904 |
VDBG_01189 | VDBG_00158 | C9S5L6 | C9S8X4 | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | Actin. | 0.668 |
VDBG_01189 | VDBG_00254 | C9S5L6 | C9S547 | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | Casein kinase I. | 0.473 |
VDBG_01189 | VDBG_01497 | C9S5L6 | C9SAB1 | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.505 |
VDBG_01189 | VDBG_06146 | C9S5L6 | C9SMM2 | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.505 |
VDBG_01189 | VDBG_08181 | C9S5L6 | C9STF6 | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | Tubulin beta-2 chain. | 0.744 |
VDBG_01189 | VDBG_08720 | C9S5L6 | C9SUZ5 | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | Protein phosphatase PP2A regulatory subunit A. | 0.422 |
VDBG_01189 | VDBG_10147 | C9S5L6 | C9SZ22 | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | Casein kinase I. | 0.473 |
VDBG_01497 | VDBG_00158 | C9SAB1 | C9S8X4 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | Actin. | 0.832 |
VDBG_01497 | VDBG_01189 | C9SAB1 | C9S5L6 | Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | T-complex protein 1 subunit alpha; Belongs to the TCP-1 chaperonin family. | 0.505 |
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