STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_079053-oxoacyl-[acyl-carrier-protein] reductase. (251 aa)    
Predicted Functional Partners:
VDBG_09859
Short-chain dehydrogenase/reductase SDR.
  
 
 0.501
VDBG_05539
Gluconate 5-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.500
VDBG_01856
Bacilysin biosynthesis oxidoreductase bacC; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.482
VDBG_01520
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
 0.457
VDBG_04929
Short-chain dehydrogenase.
  
     0.455
VDBG_09432
Oxidoreductase.
  
     0.440
VDBG_03216
3-oxoacyl-[acyl-carrier-protein] reductase.
  
     0.434
VDBG_07058
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
 0.434
VDBG_10037
3-hydroxyacyl-CoA dehydrogenase type-2.
  
   0.427
VDBG_09341
3-oxoacyl-[acyl-carrier-protein] reductase.
  
     0.405
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.