STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS78082.1KEGG: dde:Dde_0020 hypothetical protein. (208 aa)    
Predicted Functional Partners:
ACS78081.1
PFAM: Mammalian cell entry related domain protein; KEGG: dde:Dde_0021 ABC-type transport system involved in resistance to organic solvents periplasmic component-like.
       0.773
ACS78083.1
KEGG: dvl:Dvul_0033 hypothetical protein.
       0.773
ACS78084.1
Hypothetical protein.
       0.773
ACS78079.1
PFAM: protein of unknown function DUF140; KEGG: dde:Dde_0023 transporter, putative.
       0.737
ACS78080.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_1817 ABC transporter related.
       0.737
ACS78085.1
6-phosphofructokinase; PFAM: phosphofructokinase; KEGG: dde:Dde_1589 diphosphate--fructose-6-phosphate 1-phosphotransferase.
       0.628
ACS78078.1
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dde:Dde_0024 anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family.
       0.613
ACS78077.1
Cyclic nucleotide-binding protein; PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: sfu:Sfum_2453 serine phosphatase.
       0.537
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.