STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS78203.1PFAM: regulatory protein TetR; KEGG: dal:Dalk_2333 transcriptional regulator, TetR family. (212 aa)    
Predicted Functional Partners:
ACS81711.1
KEGG: dde:Dde_2118 hypothetical protein.
  
    0.553
buk
TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: dde:Dde_3128 butyrate kinase; Belongs to the acetokinase family.
       0.506
ACS81251.1
PFAM: protein of unknown function DUF401; KEGG: dde:Dde_2515 hypothetical protein.
  
     0.486
ACS78175.1
Hypothetical protein; KEGG: GH16738 gene product from transcript GH16738-RA.
     
 0.478
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.436
ACS80748.1
PFAM: regulatory protein TetR; KEGG: dde:Dde_2217 TetR family transcriptional regulator.
  
     0.429
ACS81265.1
Hypothetical protein; KEGG: rpd:RPD_2001 cytochrome c-type biogenesis protein CycH.
  
     0.403
ACS78164.1
PFAM: protein of unknown function DUF47; KEGG: dde:Dde_3780 phosphate transport regulator-like.
  
     0.402
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.