STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS78419.1TIGRFAM: TonB family protein; KEGG: dvl:Dvul_0505 TonB family protein. (175 aa)    
Predicted Functional Partners:
ACS78420.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvl:Dvul_0506 biopolymer transport protein ExbD/TolR.
  
 
 0.954
ACS78421.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvu:DVU2806 MotA/TolQ/ExbB proton channel family protein.
  
 
 0.929
ACS78518.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dde:Dde_1600 receptor precursor-mostly Fe transport.
  
 
 0.849
ACS79939.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dds:Ddes_0429 TonB-dependent receptor.
  
 
 0.849
ACS78422.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dvl:Dvul_0508 cobalamin synthesis protein, P47K.
       0.787
ACS80144.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dde:Dde_2155 biopolymer transport protein (ExbD2).
  
 
 0.782
ACS80536.1
TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvm:DvMF_2363 protein TolR.
  
 
 0.782
ACS80142.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_2153 transport protein TolQ-like.
  
 
 0.720
ACS80143.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_2154 biopolymer transport protein (ExbB)-like.
  
 
 0.720
ACS80537.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3629 TolQ protein.
  
 
 0.720
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.