STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS78471.1KEGG: dat:HRM2_02360 hypothetical protein. (268 aa)    
Predicted Functional Partners:
ACS80372.1
KEGG: dat:HRM2_06360 hypothetical protein.
 
 0.955
ACS79988.1
TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: dde:Dde_1996 glycine cleavage system T protein.
   
 0.919
ACS78472.1
PFAM: glycosyl transferase group 1; KEGG: dat:HRM2_02350 putative glycogen synthase (starch [bacterial glycogen] synthase).
 
 
 
 0.887
ACS78196.1
KEGG: bpy:Bphyt_1683 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; tyrosine protein kinase; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; serine/threonine protein kinase; PAC repeat-containing protein; GAF domain protein.
  
 
 0.865
ACS78149.1
Hypothetical protein; KEGG: dvm:DvMF_0796 calcium-binding EF-hand-containing protein.
    
 0.843
ACS78656.1
PFAM: formyl transferase domain protein; KEGG: lhk:LHK_02795 WbcV protein.
 
   0.841
ACS81203.1
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bid:Bind_0379 MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.828
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.816
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.815
ACS78238.1
PFAM: protein of unknown function DUF323; KEGG: dal:Dalk_3476 protein of unknown function DUF323.
  
 
 0.805
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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