STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS78498.1PFAM: protein of unknown function DUF877; KEGG: bpr:GBP346_A3809 type VI secretion protein, EvpB/family. (484 aa)    
Predicted Functional Partners:
ACS78501.1
TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: gme:Gmet_0273 hypothetical protein.
 
  
 0.995
ACS78487.1
TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: gme:Gmet_0280 hypothetical protein.
 
 
 0.994
ACS78500.1
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: gme:Gmet_3311 hypothetical protein.
 
  
 0.993
ACS78489.1
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: gsu:GSU0431 hypothetical protein.
 
  
 0.991
ACS78492.1
TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: pin:Ping_0023 rhs element Vgr protein.
 
  
 0.991
ACS78485.1
TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bpt:Bpet2446 hypothetical protein.
 
 
 0.987
ACS78488.1
TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: gme:Gmet_3312 hypothetical protein.
 
  
 0.985
ACS78490.1
TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: gme:Gmet_3314 hypothetical protein.
 
  
 0.985
ACS78502.1
KEGG: gme:Gmet_0274 hypothetical protein.
 
  
 0.977
ACS78484.1
TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: gsu:GSU3167 hypothetical protein.
 
  
 0.976
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.