STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS78936.1KEGG: glo:Glov_3381 hypothetical protein. (579 aa)    
Predicted Functional Partners:
ACS78938.1
PFAM: Radical SAM domain protein; KEGG: geo:Geob_0662 radical SAM domain protein.
     
 0.738
ACS78937.1
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: shl:Shal_1398 methyltransferase type 12.
       0.737
ACS78940.1
KEGG: lip:LIA019 phosphoheptose isomerase.
       0.710
ACS78939.1
PFAM: Radical SAM domain protein; KEGG: tdn:Suden_0182 radical SAM family protein.
     
 0.704
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
  
 0.604
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.591
ACS78389.1
KEGG: ankyrin repeat protein.
  
 0.580
ACS79031.1
PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_2150 glycosyl transferase family 2.
  
 
 0.566
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.549
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.548
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.