STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS79161.1PFAM: aminotransferase class I and II; KEGG: dal:Dalk_3407 aminotransferase class I and II. (386 aa)    
Predicted Functional Partners:
ACS79421.1
TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC; Citrate transporter; KEGG: dvl:Dvul_2552 Na+/H+ antiporter NhaC.
   
  
 0.624
ACS80073.1
PFAM: Na+/H+ antiporter NhaC; KEGG: dvu:DVU1978 Na+/H+ antiporter family protein.
   
  
 0.624
ACS78175.1
Hypothetical protein; KEGG: GH16738 gene product from transcript GH16738-RA.
  
 
 0.590
ACS78893.1
TIGRFAM: citrate synthase I; PFAM: Citrate synthase; KEGG: scl:sce8281 hypothetical protein.
  
 
 0.569
ACS79163.1
Anthranilate synthase; PFAM: Chorismate binding-like; KEGG: dde:Dde_3618 aminodeoxychorismate synthase, subunit I.
   
 
 0.559
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
  
 0.554
ACS79162.1
PFAM: glutamine amidotransferase class-I; KEGG: dvl:Dvul_2620 glutamine amidotransferase class-I.
     
 0.534
ACS79164.1
PFAM: aminotransferase class IV; KEGG: dvm:DvMF_2314 aminotransferase class IV.
  
  
 0.531
ACS79287.1
Aldehyde Dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.523
ACS78795.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
  
 0.519
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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