STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS79525.1PFAM: peptidase S41; SMART: peptidase S41; KEGG: sdn:Sden_0954 peptidase S41. (497 aa)    
Predicted Functional Partners:
ACS78795.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
   
   0.754
ACS79526.1
PFAM: extracellular solute-binding protein family 3; KEGG: dvm:DvMF_0180 hypothetical protein.
   
   0.738
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: dvl:Dvul_0712 phenylalanyl-tRNA synthetase, beta subunit.
   
 
 0.587
ACS78150.1
SMART: Integrin alpha beta-propellor repeat protein; KEGG: hypothetical protein.
  
   0.514
ACS78944.1
KEGG: dol:Dole_2071 hypothetical protein.
  
   0.514
ACS79736.1
Links inner and outer membrane; KEGG: azc:AZC_1396 hypothetical protein.
  
   0.514
ACS80140.1
KEGG: hypothetical protein.
  
   0.514
ACS81876.1
KEGG: dde:Dde_0038 hypothetical protein.
  
   0.514
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.505
ACS81865.1
PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: dde:Dde_3580 peptidoglycan-binding LysM.
  
  
 0.451
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.