STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS79736.1Links inner and outer membrane; KEGG: azc:AZC_1396 hypothetical protein. (1038 aa)    
Predicted Functional Partners:
ACS79001.1
PFAM: TonB-dependent receptor plug; KEGG: dat:HRM2_45170 putative puter membrane receptor.
    
 
 0.790
ACS79957.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: dvl:Dvul_1420 cell division FtsK/SpoIIIE.
   
 
 0.789
ACS78175.1
Hypothetical protein; KEGG: GH16738 gene product from transcript GH16738-RA.
  
 
 0.728
ACS78954.1
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bba:Bd2321 subtilisin-like serine protease.
  
 
 0.720
ACS79737.1
PFAM: outer membrane efflux protein; KEGG: pin:Ping_3184 outer membrane efflux protein.
 
  
 0.711
ACS79741.1
PFAM: peptidase M50; KEGG: eca:ECA0803 hypothetical protein.
 
  
 0.600
ACS79739.1
KEGG: abu:Abu_1031 hypothetical protein.
 
    0.592
ACS78196.1
KEGG: bpy:Bphyt_1683 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; tyrosine protein kinase; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; serine/threonine protein kinase; PAC repeat-containing protein; GAF domain protein.
 
 
 0.568
ACS79700.1
KEGG: bmn:BMA10247_2180 putative capsular polysaccharide biosynthesis protein.
 
 
 0.527
ACS78587.1
Hypothetical protein; KEGG: rso:RSc0102 putative calcium binding hemolysin protein.
 
 
 0.519
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.