STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS79751.1PFAM: conjugation TrbI family protein; KEGG: dps:DPPB20 conjugal transfer protein TrbI. (403 aa)    
Predicted Functional Partners:
ACS79764.1
TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: dps:DPPB18 conjugal transfer protein TrbG.
 
 0.999
ACS79768.1
PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: dps:DPPB14 conjugal transfer protein TrbE.
 
 
 0.999
ACS79769.1
PFAM: Conjugal transfer TrbD family protein; KEGG: avi:Avi_9658 conjugal transfer protein.
 
 
 0.998
ACS79765.1
PFAM: Conjugal transfer protein; KEGG: dps:DPPB17 conjugal transfer protein TrbF.
 
  
 0.994
ACS79766.1
TIGRFAM: P-type conjugative transfer protein TrbL; KEGG: kpe:KPK_1289 P-type conjugative transfer protein TrbL.
 
  
 0.993
ACS79771.1
TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: dps:DPPB12 conjugal transfer protein TrbB.
 
  
 0.993
ACS79750.1
PFAM: TRAG family protein; KEGG: ajs:Ajs_4317 conjugal transfer coupling protein TraG.
 
 
 
 0.981
ACS79770.1
PFAM: Conjugal transfer protein TrbC; KEGG: dps:DPPB13 conjugal transfer protein TrbC.
    
 0.974
ACS79767.1
TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: dps:DPPB15 conjugal transfer protein TrbJ.
    
 0.972
ACS79747.1
TIGRFAM: conjugative transfer signal peptidase TraF; KEGG: eba:p2B18 conjugal transfer peptidase TraF.
 
   
 0.960
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.