STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS79821.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0731 ATPase. (244 aa)    
Predicted Functional Partners:
ACS79820.1
PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_0585 protein of unknown function DUF214.
 
 
 0.979
ACS79822.1
PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_0583 protein of unknown function DUF214.
 
 
 0.977
ACS81290.1
PFAM: protein of unknown function DUF214; KEGG: sat:SYN_00854 export ABC transporter permease protein.
 
 0.974
ACS81582.1
PFAM: protein of unknown function DUF214; KEGG: glo:Glov_0746 protein of unknown function DUF214.
 
 0.962
ACS79819.1
KEGG: dal:Dalk_0586 hypothetical protein.
 
     0.916
ACS79818.1
KEGG: dde:Dde_0728 hypothetical protein.
 
     0.891
ACS78749.1
PFAM: protein of unknown function DUF214; KEGG: dvm:DvMF_2063 protein of unknown function DUF214.
 
 
 0.805
ACS79816.1
KEGG: dal:Dalk_1050 hypothetical protein.
 
     0.784
ACS79817.1
KEGG: dal:Dalk_1051 hypothetical protein.
 
     0.774
ACS80582.1
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: dde:Dde_1366 LolC/E family lipoprotein releasing system, transmembrane protein.
  
 
 0.770
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.