STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS79945.1KEGG: dde:Dde_1191 hypothetical protein. (208 aa)    
Predicted Functional Partners:
ACS79944.1
KEGG: dal:Dalk_2002 hypothetical protein.
 
  
  0.992
ACS78185.1
KEGG: dds:Ddes_0648 hypothetical protein.
 
  
  0.978
ACS80401.1
KEGG: dps:DP0157 hypothetical protein.
 
  
  0.933
ACS78840.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dde:Dde_1190 cobalt transport protein CbiM.
 
    0.835
ACS81258.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter, inner membrane subunit CbiQ.
 
     0.807
ACS81259.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_2006 ABC transporter related.
 
     0.799
ACS78174.1
KEGG: dde:Dde_0493 hypothetical protein.
  
     0.547
ACS78184.1
KEGG: dds:Ddes_0647 hypothetical protein.
  
     0.487
ACS78897.1
KEGG: sfu:Sfum_0090 cytochrome c family protein.
  
 
 
 0.485
ACS79946.1
KEGG: hypothetical protein.
     
 0.471
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.