STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS80026.1KEGG: dvm:DvMF_0300 CgeB family protein. (424 aa)    
Predicted Functional Partners:
ACS80027.1
PFAM: glycosyl transferase family 9; KEGG: dvu:DVU1464 heptosyltransferase family protein.
 
 
 0.947
ACS81060.1
PFAM: glycosyl transferase family 9; KEGG: dvm:DvMF_0249 glycosyl transferase family 9.
 
 
 0.794
ACS81305.1
KEGG: dvm:DvMF_0922 hypothetical protein.
 
     0.778
ACS81549.1
KEGG: dde:Dde_0075 hypothetical protein.
 
    0.778
ACS81089.1
KEGG: dvm:DvMF_0922 hypothetical protein.
 
     0.771
ACS80940.1
KEGG: dvl:Dvul_0984 hypothetical protein.
  
     0.768
ACS80868.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dvl:Dvul_2082 TPR repeat-containing protein.
  
     0.763
ACS80879.1
KEGG: dde:Dde_0564 hypothetical protein.
 
     0.762
ACS81026.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dde:Dde_1667 TPR repeat-containing protein.
  
     0.751
ACS80989.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dvm:DvMF_1136 tetratricopeptide domain protein.
  
     0.749
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.