STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS80377.1PFAM: regulatory protein TetR; KEGG: dde:Dde_2002 TetR family transcriptional regulator. (190 aa)    
Predicted Functional Partners:
ACS78316.1
KEGG: dvl:Dvul_2239 hypothetical protein.
  
     0.674
ACS81737.1
PFAM: Sporulation domain protein; KEGG: dvl:Dvul_1815 sporulation domain-containing protein.
  
     0.580
ACS79803.1
KEGG: dde:Dde_0580 cytochrome c family protein.
  
     0.566
ACS78984.1
KEGG: dde:Dde_0580 cytochrome c family protein.
  
     0.549
ACS80376.1
Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: dde:Dde_2950 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: extracellular solute-binding protein family 3; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein.
   
 
 0.510
ACS79544.1
KEGG: dds:Ddes_0909 HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
  
     0.482
ACS78175.1
Hypothetical protein; KEGG: GH16738 gene product from transcript GH16738-RA.
     
 0.478
ACS80903.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2389 iron-sulfur cluster-binding protein.
 
     0.472
ACS78695.1
PFAM: HesB/YadR/YfhF-family protein; KEGG: dvm:DvMF_0158 HesB-like domain-containing protein; Belongs to the HesB/IscA family.
  
     0.471
ACS80673.1
PFAM: glycosyl transferase group 1; KEGG: dde:Dde_1656 glycosyl transferase, group 1 family protein.
  
   
 0.471
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.