STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS80481.1KEGG: sat:SYN_00781 hypothetical protein. (553 aa)    
Predicted Functional Partners:
ACS80480.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: sat:SYN_01204 chain length determinant protein, Wzz-like protein.
     
 0.807
ACS80479.1
TIGRFAM: capsular exopolysaccharide family; KEGG: sat:SYN_00779 tyrosine-protein kinase.
     
 0.760
ACS80478.1
SMART: AAA ATPase; KEGG: sat:SYN_00778 general secretion pathway protein A.
       0.749
ACS80475.1
PFAM: polysaccharide biosynthesis protein; KEGG: dol:Dole_1836 polysaccharide biosynthesis protein.
       0.728
ACS80482.1
PFAM: polysaccharide export protein; KEGG: sat:SYN_00782 periplasmic protein involved in polysaccharide export.
       0.702
ACS80476.1
Hypothetical protein; KEGG: pla:Plav_1912 sulfotransferase.
       0.682
ACS80477.1
KEGG: hypothetical protein.
       0.682
ACS80483.1
KEGG: tbd:Tbd_1801 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
       0.593
ACS80484.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide domain protein; KEGG: gme:Gmet_1506 tetratricopeptide TPR_4.
       0.464
ACS80485.1
TIGRFAM: eight transmembrane protein EpsH; EpsI family protein; KEGG: sat:SYN_01097 hypothetical protein.
       0.406
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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