STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS80523.1PFAM: GCN5-related N-acetyltransferase; KEGG: avn:Avin_24790 N-acetyltransferase. (284 aa)    
Predicted Functional Partners:
ACS80434.1
Hypothetical protein; KEGG: sat:SYN_02891 fibronectin type III domain-containing protein.
  
    0.528
ACS79296.1
KEGG: dps:DP0367 hypothetical protein.
   
    0.522
ACS78912.1
PFAM: Ion transport 2 domain protein; KEGG: mca:MCA0647 ion transport family protein.
  
     0.503
ACS80524.1
Hypothetical protein.
       0.497
ACS80522.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_0496 glyoxalase family protein.
       0.470
ACS78240.1
HflC protein; HflC and HflK could regulate a protease.
  
    0.466
ACS78241.1
HflK protein; HflC and HflK could encode or regulate a protease.
  
    0.466
ACS79102.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: dps:DP1869 hypothetical protein.
  
    0.466
ACS81878.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: dvl:Dvul_0039 band 7 protein.
  
    0.466
ACS81464.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sat:SYN_02356 anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
     0.421
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.