STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS80926.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. (215 aa)    
Predicted Functional Partners:
ACS80927.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0233 ABC transporter, permease protein.
 
  
 0.984
ACS80928.1
KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein.
 
  
 0.963
ACS79388.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3671 polyamine ABC transporter, permease protein.
  
 
 0.753
ACS81357.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_45430 PotB1.
  
 
 0.753
ACS79386.1
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
  
 0.711
ACS81359.1
PFAM: extracellular solute-binding protein family 1; KEGG: dat:HRM2_45450 PotD.
  
  
 0.711
ACS79387.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2866 spermidine/putrescine ABC transporter membrane protein.
  
  
 0.707
ACS81356.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_45420 PotC1.
  
  
 0.707
ACS81566.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dat:HRM2_47270 CbiO3.
 
   
0.564
ACS80237.1
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: dde:Dde_0547 ComEC/Rec2-related protein.
  
  
 0.456
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.