STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS81187.1TIGRFAM: YD repeat protein; KEGG: sfu:Sfum_4063 NHL repeat containing protein. (653 aa)    
Predicted Functional Partners:
ACS80483.1
KEGG: tbd:Tbd_1801 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
   
    0.669
ACS78238.1
PFAM: protein of unknown function DUF323; KEGG: dal:Dalk_3476 protein of unknown function DUF323.
 
 
 0.577
ACS81186.1
Hypothetical protein.
       0.563
ACS78498.1
PFAM: protein of unknown function DUF877; KEGG: bpr:GBP346_A3809 type VI secretion protein, EvpB/family.
  
  
 0.556
ACS78823.1
KEGG: fimbriae-associated protein.
  
 
 0.547
ACS81445.1
KEGG: dvm:DvMF_3168 hypothetical protein.
  
 
 0.547
ACS80141.1
KEGG: dde:Dde_2152 hypothetical protein.
  
 
 0.525
ACS79700.1
KEGG: bmn:BMA10247_2180 putative capsular polysaccharide biosynthesis protein.
 
  
 0.506
ACS80477.1
KEGG: hypothetical protein.
  
     0.504
ACS79980.1
PFAM: C-type lectin domain protein; SMART: C-type lectin domain protein; KEGG: tgr:Tgr7_2353 hypothetical protein.
  
    0.493
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.