STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS81260.1KEGG: vfm:VFMJ11_A1174 lipoprotein, putative. (132 aa)    
Predicted Functional Partners:
ACS81775.1
Hypothetical protein; KEGG: geo:Geob_2662 peptidoglycan-binding LysM.
   
  
 0.937
ACS81259.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_2006 ABC transporter related.
     
 0.695
ACS81258.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter, inner membrane subunit CbiQ.
       0.693
ACS81082.1
PFAM: peptidase M48 Ste24p; KEGG: dat:HRM2_15460 endopeptidase family protein.
  
     0.576
ACS81257.1
Hypothetical protein; KEGG: pzu:PHZ_c2091 methyltransferase type 11.
       0.479
ddpX
D-Ala-D-Ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
  
     0.467
ACS81261.1
KEGG: dde:Dde_0206 hypothetical protein.
       0.458
ACS80331.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dat:HRM2_46780 putative haloacid dehalogenase-like family protein.
  
     0.404
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.