STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS81296.1TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dde:Dde_0636 TRAP dicarboxylate transporter-DctM subunit. (433 aa)    
Predicted Functional Partners:
ACS81297.1
KEGG: dde:Dde_0635 tripartite ATP-independent periplasmic transporters, DctQ component, putative.
 
     0.920
ACS81298.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dde:Dde_0634 extracellular solute-binding protein.
 
  
 0.919
ACS79451.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dps:DP1511 DctQ (C4-dicarboxylate permease, small subunit).
 
 
 0.902
ACS80750.1
KEGG: dat:HRM2_35010 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.827
ACS79452.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dps:DP1510 DctP (periplasmic C4-dicarboxylate binding protein).
  
 0.816
ACS80749.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dde:Dde_2216 extracellular solute-binding protein.
 
  
 0.815
ACS81272.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dat:HRM2_46640 TRAP-type C4-dicarboxylate transport system periplasmic component.
 
  
 0.806
ACS80219.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dat:HRM2_38830 DctP8.
 
  
 0.802
ACS78409.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: spe:Spro_4705 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.789
ACS80220.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mmw:Mmwyl1_2292 tripartite ATP-independent periplasmic transporter DctQ.
 
 
 0.734
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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