STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS81709.1KEGG: sfu:Sfum_3247 hypothetical protein. (262 aa)    
Predicted Functional Partners:
ACS81711.1
KEGG: dde:Dde_2118 hypothetical protein.
 
     0.849
ACS81708.1
Putative RNA polymerase, sigma 70 family subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.807
ACS81710.1
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dvm:DvMF_0478 tetratricopeptide TPR_2 repeat protein.
       0.806
ACS81137.1
KEGG: dvl:Dvul_0169 hypothetical protein.
 
     0.741
ACS78824.1
KEGG: dde:Dde_3184 hypothetical protein.
  
     0.725
ACS80104.1
KEGG: dvu:DVU1034 hypothetical protein.
  
     0.718
ACS81139.1
Phosphate uptake regulator, PhoU; PFAM: PhoU family protein; KEGG: tcx:Tcr_1767 hypothetical protein.
  
     0.718
ACS81138.1
KEGG: tcx:Tcr_1766 hypothetical protein.
  
     0.714
ACS81141.1
HPr kinase; KEGG: pin:Ping_2321 HPr kinase.
  
    0.684
ACS81712.1
KEGG: dvm:DvMF_0480 hypothetical protein.
       0.671
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.