Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_0643PFAM: Protein of unknown function DUF2064; KEGG: cbl:CLK_1999 hypothetical protein. (219 aa)    
Predicted Functional Partners:
Bmur_0642
PFAM: glycosyl transferase family 2; KEGG: dhd:Dhaf_3860 glycosyl transferase family 2.
     0.994
Bmur_0641
KEGG: fma:FMG_0304 iron-sulfur binding reductase.
 
     0.941
Bmur_0645
KEGG: ect:ECIAI39_1303 hypothetical protein.
 
     0.904
Bmur_0646
PFAM: SNARE associated Golgi protein; KEGG: dhd:Dhaf_3864 SNARE associated Golgi protein.
 
     0.877
Bmur_0647
PFAM: SNARE associated Golgi protein; KEGG: amt:Amet_3297 SNARE associated Golgi protein.
 
     0.861
Bmur_2614
KEGG: cph:Cpha266_0829 radical SAM domain- containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
     0.783
Bmur_0644
YciC; KEGG: bcc:BCc_173 YciC.
       0.773
Bmur_2110
SMART: Rhodanese domain protein; KEGG: msu:MS1140 SseA protein.
 
     0.477
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.