STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_0714KEGG: bhy:BHWA1_01274 hypothetical protein. (57 aa)    
Predicted Functional Partners:
purE
Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.570
Bmur_0715
KEGG: bhy:BHWA1_02427 hypothetical protein.
       0.528
Bmur_0716
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: protein of unknown function DUF164; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bhy:BHWA1_02428 phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
       0.512
purC
TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; KEGG: bhy:BHWA1_01150 phosphoribosylamidoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase.
       0.409
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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