STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_0728PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01102 extracellular solute-binding protein, family 5. (535 aa)    
Predicted Functional Partners:
Bmur_0758
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02532 binding-protein-dependent transport system, membrane component.
 
 
 0.955
Bmur_0757
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_02533 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.886
Bmur_0756
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bhy:BHWA1_02534 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.877
Bmur_0759
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_02531 binding-protein-dependent transport system, membrane component.
  
 0.808
Bmur_2024
PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02226 ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.454
Bmur_0586
PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01011 extracellular solute-binding protein, family 5.
  
  
 
0.445
Bmur_1588
PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01522 extracellular solute-binding protein, family 5.
  
  
 
0.440
Bmur_2170
PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_02512 OppA, ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.438
Bmur_1803
PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01426 extracellular solute-binding protein, family 5.
  
  
 
0.437
Bmur_0587
PFAM: extracellular solute-binding protein family 5; KEGG: bhy:BHWA1_01010 extracellular solute-binding protein, family 5.
  
  
 
0.433
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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