Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bmur_0047 | Bmur_0797 | PFAM: nucleoside recognition domain protein; KEGG: bhy:BHWA1_00129 hypothetical protein. | KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein. | 0.586 |
Bmur_0047 | Bmur_0799 | PFAM: nucleoside recognition domain protein; KEGG: bhy:BHWA1_00129 hypothetical protein. | KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | 0.597 |
Bmur_0797 | Bmur_0047 | KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein. | PFAM: nucleoside recognition domain protein; KEGG: bhy:BHWA1_00129 hypothetical protein. | 0.586 |
Bmur_0797 | Bmur_0798 | KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein. | PFAM: Domain of unknown function DUF1850; KEGG: bhy:BHWA1_02395 hypothetical protein. | 0.829 |
Bmur_0797 | Bmur_0799 | KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein. | KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | 0.939 |
Bmur_0798 | Bmur_0797 | PFAM: Domain of unknown function DUF1850; KEGG: bhy:BHWA1_02395 hypothetical protein. | KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein. | 0.829 |
Bmur_0798 | Bmur_0799 | PFAM: Domain of unknown function DUF1850; KEGG: bhy:BHWA1_02395 hypothetical protein. | KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | 0.913 |
Bmur_0799 | Bmur_0047 | KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | PFAM: nucleoside recognition domain protein; KEGG: bhy:BHWA1_00129 hypothetical protein. | 0.597 |
Bmur_0799 | Bmur_0797 | KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | KEGG: bhy:BHWA1_02396 TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein. | 0.939 |
Bmur_0799 | Bmur_0798 | KEGG: bhy:BHWA1_02394 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | PFAM: Domain of unknown function DUF1850; KEGG: bhy:BHWA1_02395 hypothetical protein. | 0.913 |