STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bmur_0806PFAM: protein of unknown function DUF255; Thioredoxin domain; KEGG: bhy:BHWA1_02615 thiol-disulfide interchange protein DsbD-like protein. (274 aa)    
Predicted Functional Partners:
Bmur_2047
TIGRFAM: redox-active disulfide protein 2; KEGG: bhy:BHWA1_02249 hypothetical protein.
  
 
 0.728
Bmur_0805
PFAM: Thioredoxin domain; KEGG: bhy:BHWA1_02614 thiol-disulfide interchange protein DsbD-like protein.
 
    
0.647
Bmur_2731
Peptide-methionine (R)-S-oxide reductase; KEGG: bhy:BHWA1_00581 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.
   
 
 0.604
Bmur_2382
Protein-disulfide reductase; KEGG: bhy:BHWA1_01034 thiol-disulfide interchange protein; PFAM: cytochrome c biogenesis protein transmembrane region.
  
     0.597
Bmur_2608
PFAM: ABC-type uncharacterised transport system; KEGG: bhy:BHWA1_00958 putative ABC-type transport system protein involved in gliding motility auxiliary component-like protein.
  
     0.493
Bmur_0807
KEGG: bhy:BHWA1_00754 hypothetical protein.
       0.478
Bmur_0808
PFAM: glycosyl transferase family 2; KEGG: bhy:BHWA1_02616 putative glycosyl transferase family 2 protein.
       0.478
Bmur_0804
Na+/Ca+ antiporter, CaCA family; KEGG: bhy:BHWA1_00896 putative Na+/Ca+ exchange protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region.
       0.452
Bmur_0803
KEGG: bhy:BHWA1_00897 hypothetical protein.
       0.405
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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