STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_0846PFAM: nitroreductase; KEGG: bhy:BHWA1_01193 DPH oxidoreductase 1, D(P)H. (169 aa)    
Predicted Functional Partners:
Bmur_0995
PFAM: protein of unknown function DUF181; KEGG: bhy:BHWA1_02355 streptolysin associated protein SagD.
  
  
 0.685
Bmur_0991
PFAM: ABC-2 type transporter; KEGG: bhy:BHWA1_02359 ABC transporter integral membrane type-2 domain containing protein.
  
  
 0.660
Bmur_0927
KEGG: bhy:BHWA1_02567 putative biotin-(acetyl-CoA carboxylase) ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein.
  
    0.642
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.642
Bmur_0845
KEGG: bhy:BHWA1_01194 hypothetical protein.
       0.565
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.548
Bmur_2184
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fph:Fphi_0487 glyoxalase family protein.
  
  
 0.538
Bmur_2381
PFAM: NADPH-dependent FMN reductase; KEGG: cac:CAC3505 multimeric flavodoxin WrbA family protein.
 
  
 0.481
Bmur_0994
PFAM: Abortive infection protein; KEGG: bhy:BHWA1_02356 CAAX amino terminal protease family protein.
  
  
 0.463
Bmur_0847
KEGG: bhy:BHWA1_01191 hypothetical protein.
       0.448
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.