STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_0962PFAM: purine or other phosphorylase family 1; KEGG: bhy:BHWA1_01548 uridine phosphorylase. (263 aa)    
Predicted Functional Partners:
Bmur_0963
PFAM: purine or other phosphorylase family 1; KEGG: bhy:BHWA1_01547 uridine phosphorylase.
 
  
 
0.979
Bmur_0295
KEGG: bhy:BHWA1_00579 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1.
 
  
0.932
Bmur_1364
PFAM: thymidine kinase; KEGG: bhy:BHWA1_01863 thymidine kinase.
     
 0.911
pyrR
Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
    
 0.903
Bmur_0581
PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bhy:BHWA1_01019 putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
 0.902
Bmur_0998
PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bhy:BHWA1_02376 putative UshA protein; putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase- like esterase; Belongs to the 5'-nucleotidase family.
    
 0.902
Bmur_2752
PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bhy:BHWA1_00606 UshA, 5'-nucleotidase/2',3'- cyclic phosphodiesterase-like esterase; Belongs to the 5'-nucleotidase family.
    
 0.902
psuG
Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
    
  0.901
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.780
Bmur_0961
PFAM: basic membrane lipoprotein; KEGG: bhy:BHWA1_01549 basic membrane lipoprotein.
       0.660
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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