STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1271PFAM: MgtC/SapB transporter; KEGG: bhy:BHWA1_01901 MgtC family protein. (264 aa)    
Predicted Functional Partners:
Bmur_2760
TIGRFAM: calcium-translocating P-type ATPase, PMCA- type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bhy:BHWA1_00231 cation transport ATPase; SMART: cation transporting ATPase domain protein.
 
 
 0.744
Bmur_0241
PFAM: protein of unknown function DUF308 membrane; KEGG: bhy:BHWA1_00095 hypothetical protein.
  
  
 0.718
Bmur_1272
PFAM: PTS system fructose subfamily IIA component; KEGG: bhy:BHWA1_01902 PTS system, IIa component.
  
    0.711
Bmur_1270
KEGG: bhy:BHWA1_01900 hypothetical protein.
       0.678
Bmur_1269
Hypothetical protein.
       0.519
Bmur_1113
KEGG: bhy:BHWA1_01543 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; NUDIX hydrolase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
  
 0.476
Bmur_1268
PFAM: glycosyl transferase family 2; KEGG: bhy:BHWA1_01875 glycoslytransferase.
       0.463
Bmur_0975
Response regulator receiver protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: response regulator receiver; KEGG: bhy:BHWA1_02176 two-component response regulator; SMART: response regulator receiver.
  
 
 0.460
Bmur_1273
KEGG: bhy:BHWA1_02025 putative dual specificity protein phosphatase.
       0.460
Bmur_0184
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.457
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.