STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1361KEGG: bhy:BHWA1_01718 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A. (377 aa)    
Predicted Functional Partners:
Bmur_1617
KEGG: bhy:BHWA1_02036 hypothetical protein.
     0.798
Bmur_1220
PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bhy:BHWA1_01599 ATPase, associated with various cellular activities, AAA 5.
 
  
 0.790
Bmur_1496
KEGG: bhy:BHWA1_01183 hypothetical protein.
 
     0.777
Bmur_1490
KEGG: bhy:BHWA1_00014 molybdate metabolism regulator.
 
     0.761
Bmur_1013
KEGG: bhy:BHWA1_01977 hypothetical protein.
 
   
 0.760
Bmur_0365
PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_00589 hypothetical protein.
  
     0.738
Bmur_2623
KEGG: bhy:BHWA1_00786 hypothetical protein.
  
     0.733
Bmur_0234
KEGG: bhy:BHWA1_00102 molybdate metabolism regulator.
 
     0.720
Bmur_1362
KEGG: bhy:BHWA1_02529 TPR domain-containing protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat.
     
 0.691
kptA
Phosphotransferase KptA/Tpt1; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
     0.570
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.