STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1472KEGG: pin:Ping_0450 FAD dependent oxidoreductase. (373 aa)    
Predicted Functional Partners:
Bmur_1473
Hypothetical protein; KEGG: pin:Ping_0449 glycosyl transferase family protein.
 
     0.947
Bmur_1471
KEGG: azo:azo3589 glycosyltransferase.
 
     0.937
Bmur_1474
KEGG: pin:Ping_0447 dolichyl-phosphate beta-D- mannosyltransferase.
 
     0.927
Bmur_1477
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: dze:Dd1591_3407 xylose isomerase domain protein TIM barrel.
 
     0.921
Bmur_1476
KEGG: rsq:Rsph17025_4042 hypothetical protein.
 
     0.920
Bmur_1478
PFAM: glycosyl transferase family 2; KEGG: dze:Dd1591_3405 dolichyl-phosphate beta-D- mannosyltransferase.
 
     0.908
Bmur_1470
KEGG: bhy:BHWA1_01695 hypothetical protein.
       0.716
Bmur_1475
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bhy:BHWA1_00926 oxidoreductase domain containing protein.
       0.656
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 0.456
Bmur_2696
KEGG: pdi:BDI_1076 citrate synthase; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.443
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.