STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1506PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01751 BlpG, outer membrane lipoprotein; Belongs to the nlpA lipoprotein family. (266 aa)    
Predicted Functional Partners:
Bmur_1504
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_01749 binding-protein-dependent transport system, inner membrane component.
 0.997
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.994
Bmur_1507
PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01752 BlpF, outer membrane lipoprotein.
 
    
0.728
Bmur_1508
PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01753 BlpE, outer membrane lipoprotein.
 
    
0.694
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
       0.549
Bmur_1509
PFAM: NLPA lipoprotein; KEGG: bhy:BHWA1_01754 BmpB, outer membrane lipoprotein; Belongs to the nlpA lipoprotein family.
 
    
0.455
Bmur_2097
TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bhy:BHWA1_01511 O-acetylhomoserine/O- acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein.
  
    0.441
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.