STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1566KEGG: bhy:BHWA1_01903 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3. (253 aa)    
Predicted Functional Partners:
Bmur_1867
KEGG: bhy:BHWA1_01566 amino acid transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 0.996
Bmur_2350
KEGG: bhy:BHWA1_01181 HisM, ABC-type amino acid transport system, permease component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.973
Bmur_1866
KEGG: bhy:BHWA1_01565 amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.969
Bmur_2351
ABC transporter related protein; KEGG: bhy:BHWA1_01180 GlnQ, ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.849
Bmur_1565
KEGG: bhy:BHWA1_01904 amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 
    
0.549
Bmur_1113
KEGG: bhy:BHWA1_01543 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; NUDIX hydrolase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
   
 
 0.466
Bmur_0975
Response regulator receiver protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: response regulator receiver; KEGG: bhy:BHWA1_02176 two-component response regulator; SMART: response regulator receiver.
   
 
 0.403
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.