STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1604PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bhy:BHWA1_01942 ferredoxin. (77 aa)    
Predicted Functional Partners:
Bmur_1605
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: bhy:BHWA1_01943 2-ketoisovalerate ferredoxin reductase.
 
 
 0.995
Bmur_1606
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bhy:BHWA1_01944 thiamine pyrophosphate.
 
 
 0.995
Bmur_1607
KEGG: bhy:BHWA1_01945 pyruvate ferredoxin oxireductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase.
 
 
 0.994
Bmur_2697
TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: pdi:BDI_1075 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.
     
 0.901
Bmur_0820
KEGG: bhy:BHWA1_01224 glutamate synthase (DPH); TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.829
Bmur_0519
PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00947 aspartate aminotransferase.
   
 
 0.804
Bmur_2610
PFAM: aminotransferase class I and II; KEGG: bhy:BHWA1_00946 aspartate aminotransferase.
   
 
 0.804
Bmur_2782
KEGG: bhy:BHWA1_00140 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SMART: Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.803
Bmur_0225
KEGG: bhy:BHWA1_00110 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
  0.800
Bmur_0379
KEGG: bhy:BHWA1_00426 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
  0.800
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.