Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bmur_1685KEGG: bhy:BHWA1_01147 hypothetical protein. (150 aa)    
Predicted Functional Partners:
Bmur_1684
Hypothetical protein; KEGG: mmi:MMAR_2102 PE-PGRS family protein.
      
0.773
Bmur_1686
KEGG: mmy:MSC_0285 prolipoprotein.
       0.773
Bmur_1687
KEGG: hau:Haur_1369 TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
       0.773
Bmur_1683
KEGG: hypothetical protein.
       0.757
Bmur_1688
KEGG: hypothetical protein.
       0.542
Bmur_1681
Response regulator receiver protein; PFAM: Sigma-70 region 4 type 2; KEGG: bhy:BHWA1_00983 hypothetical protein.
       0.433
Bmur_1689
KEGG: hypothetical protein.
       0.421
Bmur_1690
KEGG: mac:MA3808 hypothetical protein.
       0.416
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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