Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bmur_1971Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: bhy:BHWA1_02186 hypothetical protein. (261 aa)    
Predicted Functional Partners:
Bmur_1970
KEGG: bhy:BHWA1_02185 integral outer membrane protein TolC, efflux pump component.
 
   
 0.797
Bmur_2623
KEGG: bhy:BHWA1_00786 hypothetical protein.
  
   
 0.533
Bmur_1273
KEGG: bhy:BHWA1_02025 putative dual specificity protein phosphatase.
  
     0.531
Bmur_0234
KEGG: bhy:BHWA1_00102 molybdate metabolism regulator.
  
     0.527
Bmur_1567
PFAM: zinc finger SWIM domain protein; KEGG: bhy:BHWA1_01383 zinc finger SIM domain protein.
  
     0.521
Bmur_1587
KEGG: bhy:BHWA1_01521 hypothetical protein.
  
     0.504
Bmur_1490
KEGG: bhy:BHWA1_00014 molybdate metabolism regulator.
  
     0.497
Bmur_1529
KEGG: bhy:BHWA1_01978 hypothetical protein.
  
   
 0.497
Bmur_1013
KEGG: bhy:BHWA1_01977 hypothetical protein.
  
     0.494
Bmur_2634
PFAM: TPR repeat-containing protein; KEGG: bhy:BHWA1_00796 TPR domain-containing protein.
  
   
 0.494
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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