STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1981KEGG: bhy:BHWA1_02196 putative ankyrin repeat- containing protein. (74 aa)    
Predicted Functional Partners:
Bmur_1982
Ankyrin; KEGG: bhy:BHWA1_02196 putative ankyrin repeat- containing protein; PFAM: Ankyrin; SMART: Ankyrin.
      0.592
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.495
Bmur_1641
KEGG: bhy:BHWA1_01628 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
 0.484
Bmur_1653
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: bhy:BHWA1_01633 TPR domain-containing protein.
  
 0.484
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
  
   0.475
Bmur_1979
PFAM: glycosyl transferase family 14; KEGG: phe:Phep_1973 glycosyl transferase family 14.
   
   0.463
Bmur_0192
KEGG: pmt:PMT0296 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
   
  0.458
Bmur_0809
KEGG: bhy:BHWA1_02451 TPR domain-containing protein.
   
  0.458
Bmur_1014
PFAM: TPR repeat-containing protein; KEGG: bhy:BHWA1_01978 hypothetical protein.
   
  0.458
Bmur_1261
KEGG: bhy:BHWA1_01595 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat.
   
  0.458
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.