STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1997KEGG: bhy:BHWA1_02292 hypothetical protein. (243 aa)    
Predicted Functional Partners:
Bmur_1998
KEGG: bhy:BHWA1_02293 hypothetical protein.
       0.745
Bmur_1996
KEGG: bhy:BHWA1_02291 tia invasion determinant.
     
 0.727
Invasin
Invasin; KEGG: bhy:BHWA1_02290 invasin; opacity protein-like surface antigens.
     
 0.722
Bmur_1999
KEGG: bhy:BHWA1_02294 hypothetical protein.
       0.698
Bmur_1994
KEGG: bhy:BHWA1_02289 hypothetical protein.
       0.462
Bmur_1993
KEGG: bhy:BHWA1_02288 hypothetical protein.
       0.429
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.